Barrier Immunity at a Glance

1 Overview: Why “Barrier Immunity”?

Before a pathogen confronts circulating leukocytes it must first traverse multilayered defenses that are physical (structural), chemical (molecular) and cellular (sentinel-cell) barriers.  These barriers are evolutionarily ancient, encode tissue specificity and are continuously remodelled by commensal microbiota, neural inputs and systemic cytokines.  Failure at any tier precipitates infection, allergy or autoinflammation.  

2 Physical Barriers

LevelKey structuresMechanistic highlights
SkinCornified epidermal layers, tight junctions (claudin-1, occludin) and lipid-packed stratum corneumFilaggrin-driven natural moisturizing factors maintain water-lipid gradients that suppress bacterial growth.  Epidermal desmosomes transmit mechanical stress without breaching permeability.  Genetic or cytokine-induced down-regulation (e.g., IL-4/IL-13 in atopic dermatitis) dismantles junctional complexes.  
Respiratory tractPseudostratified ciliated epithelium with airway surface liquid and mucociliary escalatorCoordinated ciliary beating (≥12 Hz) moves mucus at ≈5 mm min⁻¹; drugs that raise Cl⁻ secretion (e.g., CFTR potentiators) rescue flow and curb SARS-CoV-2 replication in vitro.  
Gastro-intestinal tractSingle-layer columnar epithelium, gastric mucus–bicarbonate “unstirred layer”, peristaltic flowThe inner colonic mucus sheet excludes bacteria (< 1 µm penetration) while outer mucus is colonised by commensals that consume O-glycans, shaping niche availability.
Uro-genital & ocular surfacesTransitional epithelium with umbrella cells; blinking/tear flowTransitional cells add apical uroplakins forming crystalline plaques impermeable to urea and protons. Tear fluid’s lysozyme and sIgA continuously bathe the cornea.

Additional mechanical forces—blinking, sneezing, peristalsis, urine flow—create sheer stress that dislodges microbes before adherence.

3 Chemical Barriers

  1. Antimicrobial peptides (AMPs) – α/β-defensins, LL-37 cathelicidin, RegIIIγ and S100A7/A8/A9 are electrostatically attracted to anionic bacterial membranes, forming toroidal pores or triggering ROS production; they also chemo-attract and polarise immune cells.  
  2. Enzymes & small molecules – lysozyme (muramidase), secretory phospholipase A₂, lactoferrin (Fe³⁺ sequestration), calprotectin (Zn²⁺/Mn²⁺ chelation) and gastric HCl (pH 1.5–3). Paneth-cell cryptdin release is tuned by NOD2 sensing of muramyl-di-peptide.
  3. Complement at the barrier interface – local expression of C3/C5 by epithelial and stromal cells equips tissue-fluids with opsonins and anaphylatoxins independent of liver supply; dysregulated C3a/C5a skews Th2 priming across skin, gut and lung.  
  4. Surfactant & collectins – SP-A/SP-D and mannose-binding lectin agglutinate microbes and accelerate complement-lectin-pathway activation.
  5. Reactive oxygen-nitrogen species (ROS/RNS) – DUOX1/2-derived H₂O₂ at mucosal tips, MPO-dependent hypochlorous acid in neutrophils, and iNOS-generated NO in epithelial cells provide microbicidal chemistry and redox signalling.
  6. Microbiota-derived metabolites – short-chain fatty acids (butyrate, propionate) strengthen tight-junction integrity and modulate histone acetylation in epithelial stem cells.  Commensal bacteriocins and nutrient competition enforce colonization resistance.  

4 Cellular Barriers

Cell typeTissue niche & sentinel function
Keratinocytes & mucosal epithelial cellsExpress >40 pattern-recognition receptors (TLR1–10, NOD1/2, RIG-I) and secrete IL-1β, IL-18, GM-CSF and IL-33 (“alarmins”) upon damage.
Intra-epithelial lymphocytes (IELs)γδ TCR⁺ and CD8αα⁺ αβ T cells patrol the basolateral membrane, rapidly deploy perforin/granzymes and produce IFN-γ to induce barrier-tightening claudins.
Innate lymphoid cells (ILC1-3)Tissue-resident; ILC3-derived IL-22 drives STAT3-mediated epitheliopoiesis, mucus and AMP transcription, whereas ILC2-derived amphiregulin repairs helminth-damaged epithelium.  
Resident phagocytesLangerhans cells form tight junction–penetrating dendrites to sample antigen without fluid leakage; alveolar macrophages clear surfactant-bound particles and secrete TGF-β to maintain quiescence.
Neutrophils & NETsRapid extravasation through post-capillary venules; neutrophil extracellular traps (NETs) laced with histones and elastase immobilise fungi in the stratum corneum.
Mast cells, basophils & eosinophilsStrategically located near vasculature and nerves; upon IgE cross-linking release histamine, tryptase and eicosanoids that increase vascular permeability and recruit effector leukocytes.

Collectively, these cells form a “virtual epithelium” of immune sentinels that extend the protective reach beyond structural boundaries.

5 Integration & Homeostatic Regulation

  • Epithelial–immune crosstalk: microbial ligands → epithelial IL-25/33 & TSLP → activate ILC2 and dendritic cells that instruct Th2 differentiation; conversely, ILC3-IL-22 maintains tight junctions, illustrating bidirectional feedback.  
  • Neuro-immune interactions: sensory neurons detect noxious stimuli (TRPV1) and secrete CGRP, which dampens IL-17 and neutrophil recruitment to prevent excessive tissue damage.
  • Complement–cytokine synergy: C3aR/C5aR engagement on DCs lowers the activation threshold for allergen-specific Th2 cells, linking fluid-phase danger sensing with adaptive skewing.  

6 Pathology of Barrier Failure

DisorderBarrier defectImmune consequence
Atopic dermatitisFilaggrin mutation; Th2 cytokines disrupt claudin-1Staphylococcal superinfection, heightened IgE production
Cystic fibrosisDehydrated mucus, impaired mucociliary clearancePersistent Pseudomonas & neutrophil-dominated inflammation  
Inflammatory bowel diseaseReduced MUC2 & defensins; Paneth-cell apoptosisDysbiosis, chronic Th17/Tc17 loops
Complement-driven asthmaEpithelial C3/C5 overproductionExaggerated eosinophilia and airway hyper-responsiveness  

7 Therapeutic & Engineering Frontiers

  • Barrier reinforcement – topical ceramide-rich emollients, IL-22 agonists or recombinant RegIIIγ to expedite epithelial restitution.
  • Chemical mimetics – synthetic AMP peptidomimetics (e.g., brilacidin) and complement inhibitors (C5aR1 antagonists) to balance protection versus inflammation.
  • Microbiota modulation – live biotherapeutics producing butyrate or bacteriocins to restore colonization resistance following antibiotics.

8 Selected References

Caballero-Flores, G., Pickard, J. M., & Núñez, G. (2023). Microbiota-mediated colonization resistance: Mechanisms and regulationNature Reviews Microbiology, 21(6), 347–360. https://doi.org/10.1038/s41579-022-00833-7  

Campos-Gómez, J., Fernandez Petty, C., & Rowe, S. M. (2023). Mucociliary clearance augmenting drugs block SARS-CoV-2 replication in human airway epithelial cells. American Journal of Physiology—Lung Cellular and Molecular Physiology, 324(4), L493–L506. https://doi.org/10.1152/ajplung.00285.2022  

Fukuda, K., Ito, Y., & Amagai, M. (2025). Barrier integrity and immunity: Exploring the cutaneous front line in health and disease. Annual Review of Immunology, 43, 219–252. https://doi.org/10.1146/annurev-immunol-082323-030832  

Kalló, G., Kumar, A., Tőzsér, J., & Csősz, É. (2022). Chemical barrier proteins in human body fluids. Biomedicines, 10(7), 1472. https://doi.org/10.3390/biomedicines10071472  

Ryu, S., Lim, M., Kim, J., & Kim, H. Y. (2023). Versatile roles of innate lymphoid cells at the mucosal barrier: From homeostasis to pathological inflammation. Experimental & Molecular Medicine, 55, 1845–1857. https://doi.org/10.1038/s12276-023-01022-z  

Thomas, S. A., & Lajoie, S. (2025). Complement’s involvement in allergic Th2 immunity: A cross-barrier perspective. Journal of Clinical Investigation, 135(9), e188352. https://doi.org/10.1172/JCI188352  

Van Harten, R. M., van Zoelen, E. C., & Netea, M. G. (2023). Antimicrobial peptides’ immune-modulation role in intracellular bacterial infection. Frontiers in Immunology, 14, 1119574. https://doi.org/10.3389/fimmu.2023.1119574