Phagocytes in Human Immunology

1 Why Focus on Phagocytes?

Phagocytes— these are macrophages, neutrophils, dendritic cells (DCs), monocytes and a handful of “special teams” such as eosinophils and Langerhans cells—constitute the professional ingesters of the immune repertoire.  They provide (i) first-contact host defence, (ii) orchestration of downstream adaptive immunity, and (iii) cleanup and repair after inflammation.  They are therefore both sentinels and governors of immune homeostasis.  

2 Developmental Origins and Emergency Expansion

StageDefault pathwayKey transcription factorsEmergency myelopoiesis tweaks
Granulocyte–monocyte progenitor (GMP)Stem-cell cytokines (SCF, FLT3L) → GMP → neutrophil or monocyte lineagePU.1, C/EBPα, IRF8IL-6/STAT3 and G-CSF force granulocytic bias and accelerate cell-cycle kinetics (6-fold output in <48 h) during sepsis or chemotherapy-induced cytopenia  
Common dendritic-cell progenitor (CDP)FLT3L → pre-cDC → cDC1 / cDC2; TCF4 → pDCBATF3 (cDC1), IRF4 (cDC2)IFN-I drive “emergency DC-poiesis” that favours pDC expansion in viral infection

Clinical pearl – Exaggerated emergency myelopoiesis underlies paraneoplastic neutrophilia and the myeloid-derived suppressor cell (MDSC) surge that blunts antitumour immunity.  

3 Molecular Mechanics of Phagocytosis

  1. Recognition (the “zipper” phase)
    • Opsonic receptors—FcγR, CR1/3—bind IgG and C3 fragments; non-opsonic PRRs such as Dectin-1 and MARCO detect β-glucan and bacterial lipids.
  2. Engulfment & Actin remodellingITAM→Syk→PI3K→Rac/WAVE drives a cup-shaped F-actin collar; catch-bond mechanics ensure only high-avidity targets are taken up.
  3. Phagosome maturationRab5→Rab7 exchange, V-ATPase acidification (pH ≈ 5), and TMEM206/ASOR proton-activated Cl⁻ channelsdissipate charge to sustain the H⁺ gradient  .
  4. Microbicidal modulesNADPH-oxidase → O₂•⁻ → H₂O₂ / HOCl; iNOS produces NO• that combines with superoxide to form peroxynitrite; cathepsins, lysozyme and metal intoxication (Zn²⁺ burst) complete the kill.

4 Macrophages

  • Resident vs. monocyte-derived Microglia, Kupffer, and alveolar macrophages are yolk-sac/fetal-liver derivatives with self-renewal; inflammation recruits CCR2⁺ Ly6Cᵗᵐᵉʳʳᵧ⁺ monocytes that differentiate in situ.
  • Activation spectrum Single-cell RNA-seq reveals a continuum rather than M1/M2 binaries, with NF-κB-driven “early inflammatory”, STAT6/PPARγ “pro-resolving” and TREM2⁺ fibrosis-associated states  .
  • Metabolic rewiring Inflammatory macrophages rely on aerobic glycolysis and itaconate synthesis; reparative macrophages re-establish mitochondrial fusion and β-oxidation.
  • Disease links
    • Fibrosis Alveolar TREM2⁺ Mo-macrophages drive collagen deposition; anti-TREM2 antibodies reduce lung fibrosis in mice  .
    • Cancer CSF1R-dependent tumour-associated macrophages (TAMs) suppress cytotoxic T cells; durable CSF1R blockade reprograms TAMs and synergises with checkpoint inhibitors  .

5 Neutrophils

ThemeDetailsClinical correlation
HeterogeneityMaturing neutrophils acquire granule strata (primary–tertiary) and transcriptional subsets such as pro-angiogenic, PMN-MDSC and interferon-programmed cells  Tumour PMN-MDSCs mediate CAR-T resistance
Swarming behaviourATP–LTB₄ relay waves coordinate concentric recruitment; NADPH-oxidase negative feedback creates self-extinguishingchemotactic pulses  Failure of wave shutdown in chronic granulomatous disease (CGD) causes uncontrolled neutrophil clustering
NETosisPAD4-mediated histone citrullination expels chromatin webs; serves antimicrobial trapping but also catalyses immunothrombosis  Excess NETs foster deep-vein thrombosis and fuel cancer metastasis

Primary deficiency spotlight – CGD (NOX2 mutations) presents with recurrent catalase-positive infections and granuloma formation; prophylactic TMP-SMX + itraconazole and IFN-γ injections reduce mortality  .

6 Dendritic Cells

  • Subset overview
    • cDC1 (XCR1⁺, BATF3/IRF8)—specialists in cross-presenting viral and tumour antigens.
    • cDC2 (CD172a⁺, IRF4)—flexible instructors of Th2/Th17 immunity; recent work shows functional micro-clusters within cDC2 distinguished by Notch and KLF4 activity  .
    • pDC (TCF4⁺)—high-capacity type-I IFN producers in antiviral states.
    • mo-DC & Langerhans cells—inflammatory or barrier-resident variants; Langerhans dendrites cross tight junctions to sample surface antigens without breaching epidermal integrity  .
  • Clinical translation Genetic “re-wiring” of tumour cells with BATF3/IRF8/PU.1 converts them into cDC1-like antigen presenters, yielding potent in-situ cancer vaccines in murine models  .

7 Other Phagocytic Specialists

CellNiche functionPathology when dysregulated
Monocytes (Ly6C⁺/⁻)Intravascular patrol, rapid tissue seedingMonocytosis predicts cardiovascular risk
Eosinophils & basophilsFcεRI-mediated phagocytosis of opsonised parasites; granule toxin releaseAllergy, hypereosinophilic syndromes
Mast cellsPerivascular sentinels—phagocytose nanoparticles and secrete pre-formed mediatorsAnaphylaxis, mastocytosis

8 Cross-Talk Circuits

  • Neutrophil→Macrophage Aged CXCR4^hi neutrophils transmigrate back to marrow, delivering S100A8/A9 that amplifies G-CSF and emergency myelopoiesis  .
  • Macrophage/DC→T cell IL-12 from cDC1 licenses cytotoxic T lymphocytes; PD-L1⁺ macrophages induce T-cell exhaustion in tumours.
  • Phagocyte-stromal Scar-associated TREM2⁺ macrophages instruct PDGFRβ⁺ fibroblasts to deposit collagen; stromal IL-33 feeds back to sustain macrophage survival.

9 Therapeutic & Diagnostic Frontiers

StrategyMechanismDevelopment stage
CSF1R inhibitors (e.g., BLZ945)Deplete or re-educate TAMsPhase II trials in glioma & breast CA  
PAD4 or DNase I blockersLimit deleterious NETosisPre-clinical thrombosis models  
TREM2 antagonistsReduce fibrosis-driving macrophagesPre-clinical IPF mouse data  
In-vivo DC reprogramming (IRF8/BATF3 gene transfer)Convert tumour cells into professional APCsProof-of-concept in mice  

10 Summary

  1. Lineage—All professional phagocytes originate from myeloid progenitors but diverge early via distinct transcription factors and tissue imprinting.
  2. Function depends on context—Macrophage and neutrophil phenotypes are plastic, governed by cytokines, metabolites and mechanical cues.
  3. Defects matter clinically—From CGD to cancer-associated immunosuppression, phagocyte dysfunction has direct diagnostic and therapeutic implications.
  4. Therapies are here—Targeting phagocytes (CSF1R, TREM2, NETosis) is an expanding frontier in oncology, fibrosis and thrombosis.
  5. Lifelong learning—Emerging single-cell and spatial ‘omics will continue to refine phagocyte taxonomy and open new intervention windows.

References

  • Brown, L., & Yipp, B. G. (2023). Neutrophil swarming: Is a good offense the best defense? iScience, 26(9), 107655. https://doi.org/10.1016/j.isci.2023.107655  
  • Cui, H., Banerjee, S., Xie, N., et al. (2025). TREM2 promotes lung fibrosis via controlling alveolar macrophage survival and pro-fibrotic activity. Nature Communications, 16, 1761. https://doi.org/10.1038/s41467-025-57024-0  
  • Frontiers Immunology Editorial Board. (2024). Dendritic cell subsets and implications for cancer immunotherapy.Frontiers in Immunology. https://doi.org/10.3389/fimmu.2024.1393451  
  • Mayo Clinic Staff. (2025). Chronic granulomatous disease: Diagnosis and treatment. Mayo Clinic. https://www.mayoclinic.org/diseases-conditions/chronic-granulomatous-disease/  
  • Sato, T., Sugiyama, D., Koseki, J., et al. (2025). Sustained inhibition of CSF1R signaling augments antitumor immunity through inhibiting tumor-associated macrophages. JCI Insight, 10(1), e178146. https://doi.org/10.1172/jci.insight.178146  
  • Swann, J. W., Olson, O. C., & Passegué, E. (2024). Made to order: Emergency myelopoiesis and demand-adapted innate immune cell production. Nature Reviews Immunology, 24(8), 596-613. https://doi.org/10.1038/s41577-024-00998-7  
  • Wang, H., Kim, S. J., Lei, Y., & Tsung, A. (2024). Neutrophil extracellular traps in homeostasis and disease. Signal Transduction and Targeted Therapy, 9, 235. https://doi.org/10.1038/s41392-024-01933-x  
  • Yamada, R., & colleagues. (2024). Proton-gated anion transport governs macropinosome shrinkage via TMEM206.Nature Cell Biology. Advance online publication. https://pubmed.ncbi.nlm.nih.gov/ (Article ID PMCID: PMC9203271)  
  • Yeo, C., et al. (2024). Exploring neutrophil heterogeneity and plasticity in health and disease. Clinical & Molecular Immunology Review 17, 45-68. https://doi.org/10.1002/mco2.70063  
  • Zhang, L., Ascic, E., & Pereira, C.-F. (2024). In-vivo dendritic-cell reprogramming for cancer immunotherapy.Science, 386, eadn9083. https://doi.org/10.1126/science.adn9083